Dual stack routing implements dual IP layers in hosts and routers, supporting both IPv6 and IPv4. A dual stack architecture supports both IPv4 and IPv6 traffic and routes the appropriate traffic as required to any device on the network. Administrators can update network components and applications to IPv6 on their own schedule, and even maintain some IPv4 support indefinitely if that is necessary. Devices that are on this type of network, and connect to the Internet, can query Internet DNS servers for both IPv4 and IPv6 addresses. If the Internet site supports IPv6, the device can easily connect using the IPv6 address. If the Internet site does not support IPv6, then the device can connect using the IPv4 addresses.

In FortiOS, dual stack architecture it is not comprised merely of basic addressing functions that operate in both versions of IP. The other features of the appliance, such as UTM and routing, can also use both IP stacks.

If an organization with a mixed network uses an Internet service provider that does not support IPv6, they can use an IPv6 tunnel broker to connect to IPv6 addresses that are on the Internet. FortiOS supports IPv6 tunnelling over IPv4 networks to tunnel brokers. The tunnel broker extracts the IPv6 packets from the tunnel and routes them to their destinations.