Chapter 3 Authentication for FortiOS 5.0 : Agent-based FSSO : Troubleshooting FSSO : Users from the Windows AD network are not able to access the network : Solutions
  
Solutions
If there is only one Collector agent, configure additional Collector agents in the domain to act as backups. They will provide the redundancy required if the original collector goes offline. Remember to add them to the Fortinet Single Sign-On Agent entry under User & Device > Authentication > Single Sign-On on the web-based manager or config user fsso in the CLI. If the server and port for the new agent are not in the list, it will not be contacted.
Ensure the Collector agent has at least 64kbps bandwidth to the FortiGate unit. If not, information FSSO information may not reach the FortiGate unit resulting in outages. The best solution is to configure traffic shaping between the FortiGate unit and the Collector agent to ensure that minimum bandwidth is always available.
If some users can not connect, verify their Windows AD records to find groups in common, and investigate the state of those groups focusing on any recent changes. It may be a group or permission change is the reason.
There may be a a problem with the user list. See “User list from Windows AD is empty”.